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Downsampled mESC gene expression counts to be used for vignette.

Usage

data(demo_counts)

Format

A 1000 x 10 matrix of normalized gene expression with each column as a different sample and genes in the rows.

rows

Gene names as Ensembl IDs

cols

Individual sample IDs

Source

Skelly et al., Mapping the Effects of Genetic Variation on Chromatin State and Gene Expression Reveals Loci That Control Ground State Pluripotency, Cell Stem Cell (2020), https://doi.org/10.1016/j.stem.2020.07.005